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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899794.1_cds_XP_016449818.1_44327
CDS Infomation

[gene=LOC107774706] [db_xref=GeneID:107774706] [protein=embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-like isoform X2] [protein_id=XP_016449818.1] [location=complement(join(119600..120145,121140..121205,121320..121429,123154..123219,123605..123717,124137..124297))] [gbkey=CDS]
Sequence

ATGGCTTACTTATATGGATTGAATATCTTGCTGTCTTGGTCCGTGCAAACAGTATATGAC
CGTGGTTGTTTGCAGTTTAATGCTCGGTCTGAATCAATAAAGGAGAAGGCTTCATTTCGC
CGCCTTGTCCCGAAGAATAGGTGCCTGGTGGCAGTTGAGGGATTTTATGAGTGGAAAAAG
GATGGATCGAAAAAGCAACCTTATTACATACATTTTAAGGATGCTCGGCCCCTGGTGTTT
GCTGCCCTTTTTGACTCTTGGAAGAATCCTGAAGGAGAGGTTCTTTATACATTCACTATA
TTGACAACTTCGGTGTCTTCATCTTTAGAATGGCTCCATGACAGGATGCCTGTCATTTTC
GGAAACAAGGATGCGGCTGATATGTGGTTAAGTAGTTCTCCGTCATCCAACATTGACATG
CTATTGAAACCATATGAAGAGTCAGATTTGGCTTGGTACCCTGTGACACCTGCAATGGGT
AAGACTTCTTTTGATGGACCGGAGTGCATCAAAGAGTTGCAACTCAAGGCTACTGAGACC
AGATCGATATCACAATTTTTCTCAAAGAAAGGAGAAAAAGACCTAAAGGAGCAGAAGCCT
CATATCAAAGCAGAGGAAGAGTCCTTGAATACTGATCAGGCAGAGAGCTTGAAGCAGGAA
CCTGAATCAGACCATGTAGGCGATCAGCGTTCCCCAGACAAACCGGAGGTTTTTGCTTCT
GCTGGGACCACAGACATAAAAGTTGAGCAAGACTTTGATGAGTCAGGTTGTAAACAGTCA
TTGACTGGTCAAACCGGAAATCCACCTGGAAAAGTAGGTAGTGTTGCCAGTGATAAGGCG
AAAGGCTTGAAAGAGGAGTCTGAGGATATTAAACCAAATGTTTCTGTTCTGCCCCAGGAG
GGAAGTGGGGATTCTGGAACCAAGAGAGACTATGAGGAGCTCTCAGGTAATGCAAGGCCT
CTTGCTAAGGGGGCTAACAAGCACGTAAGCCCATCTCAAAAAAAAGCTAAAGGGGCTGGT
GACAAACAGCCTACTCTGTTTTCTTTCTTTGGGAAAGGTTAG

Peptide Sequence

PEP ID

XP_016449818.1
PEP Infomation

PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-like isoform X2 [Nicotiana tabacum]
Sequence

MAYLYGLNILLSWSVQTVYDRGCLQFNARSESIKEKASFRRLVPKNRCLVAVEGFYEWKK
DGSKKQPYYIHFKDARPLVFAALFDSWKNPEGEVLYTFTILTTSVSSSLEWLHDRMPVIF
GNKDAADMWLSSSPSSNIDMLLKPYEESDLAWYPVTPAMGKTSFDGPECIKELQLKATET
RSISQFFSKKGEKDLKEQKPHIKAEEESLNTDQAESLKQEPESDHVGDQRSPDKPEVFAS
AGTTDIKVEQDFDESGCKQSLTGQTGNPPGKVGSVASDKAKGLKEESEDIKPNVSVLPQE
GSGDSGTKRDYEELSGNARPLAKGANKHVSPSQKKAKGAGDKQPTLFSFFGKG

Transcript Sequence

Gene sequence data has not been registered.